Package: phers
Type: Package
Title: Calculate Phenotype Risk Scores
Version: 1.0.5
Authors@R: c(
  person('Jake', 'Hughey', , 'jakejhughey@gmail.com', c('aut', 'cre')),
  person('Layla', 'Aref', , 'larefnezhad@gmail.com', 'aut'))
Description: Use phenotype risk scores based on linked clinical and
        genetic data to study Mendelian disease and rare genetic
        variants. See Bastarache et al. 2018
        <doi:10.1126/science.aal4043>.
URL: https://phers.hugheylab.org, https://github.com/hugheylab/phers
License: GPL-2
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.3.3
Roxygen: list(markdown = TRUE)
Depends: R (>= 3.5)
Imports: BEDMatrix (>= 2.0.3), checkmate (>= 2.0.0), data.table (>=
        1.5.0), foreach (>= 1.5.2), iterators (>= 1.0.14), survival (>=
        3.3.1)
Suggests: doParallel (>= 1.0.17), knitr, rmarkdown, testthat (>= 3.1.0)
Config/testthat/edition: 3
Repository: https://hugheylab.r-universe.dev
Date/Publication: 2026-03-03 05:16:15 UTC
RemoteUrl: https://github.com/hugheylab/phers
RemoteRef: HEAD
RemoteSha: 7cf555bc2bae2a96409fcceb4620f1727cd1a18f
NeedsCompilation: no
Packaged: 2026-07-03 05:53:19 UTC; root
Author: Jake Hughey [aut, cre],
  Layla Aref [aut]
Maintainer: Jake Hughey <jakejhughey@gmail.com>