Package: limorhyde
Title: Differential Analysis of Rhythmic Transcriptome Data
Version: 1.0.3
Authors@R: c(
  person('Jake', 'Hughey', , 'jakejhughey@gmail.com', c('aut', 'cre')), 
  person('Jordan', 'Singer', , 'jordan.m.singer@vumc.org', 'ctb'))
Description: A flexible approach, inspired by cosinor regression, for
        differential analysis of rhythmic transcriptome data. See
        Singer and Hughey (2018) <doi:10.1177/0748730418813785>.
Depends: R (>= 3.5.0)
License: GPL-2
URL: https://limorhyde.hugheylab.org,
        https://github.com/hugheylab/limorhyde
Encoding: UTF-8
RoxygenNote: 7.3.3
Roxygen: list(markdown = TRUE)
Imports: pbs (>= 1.1)
Suggests: annotate (>= 1.58.0), data.table (>= 1.12.2), foreach (>=
        1.4.4), ggplot2 (>= 2.2.1), knitr (>= 1.20), limma (>= 3.36.1),
        matrixStats (>= 0.56.0), org.Mm.eg.db (>= 3.6.0), rmarkdown (>=
        1.9), testthat (>= 3.0.4)
VignetteBuilder: knitr
BugReports: https://github.com/hugheylab/limorhyde/issues
Repository: https://hugheylab.r-universe.dev
Date/Publication: 2026-01-20 10:07:01 UTC
RemoteUrl: https://github.com/hugheylab/limorhyde
RemoteRef: HEAD
RemoteSha: de51f1b89ac3ebc60a61219cd9e6d8c258f07d4b
NeedsCompilation: no
Packaged: 2026-06-19 08:46:54 UTC; root
Author: Jake Hughey [aut, cre],
  Jordan Singer [ctb]
Maintainer: Jake Hughey <jakejhughey@gmail.com>