Package: limorhyde 1.0.3

Jake Hughey

limorhyde: Differential Analysis of Rhythmic Transcriptome Data

A flexible approach, inspired by cosinor regression, for differential analysis of rhythmic transcriptome data. See Singer and Hughey (2018) <doi:10.1177/0748730418813785>.

Authors:Jake Hughey [aut, cre], Jordan Singer [ctb]

limorhyde_1.0.3.tar.gz
limorhyde_1.0.3.zip(r-4.7)limorhyde_1.0.3.zip(r-4.6)limorhyde_1.0.3.zip(r-4.5)
limorhyde_1.0.3.tgz(r-4.6-any)limorhyde_1.0.3.tgz(r-4.5-any)
limorhyde_1.0.3.tar.gz(r-4.7-any)limorhyde_1.0.3.tar.gz(r-4.6-any)
limorhyde_1.0.3.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
limorhyde/json (API)
NEWS

# Install 'limorhyde' in R:
install.packages('limorhyde', repos = c('https://hugheylab.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/hugheylab/limorhyde/issues

Pkgdown/docs site:https://limorhyde.hugheylab.org

On CRAN:

Conda:

4.00 score 2 stars 6 scripts 245 downloads 3 exports 1 dependencies

Last updated from:de51f1b89a. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK148
source / vignettesOK217
linux-release-x86_64OK152
macos-release-arm64OK97
macos-oldrel-arm64OK133
windows-develOK100
windows-releaseOK99
windows-oldrelOK137
wasm-releaseOK168

Exports:getCosinorBasisgetSplineBasislimorhyde

Dependencies:pbs

Analyzing circadian transcriptome data with LimoRhyde

Rendered fromintroduction.Rmdusingknitr::rmarkdownon May 20 2026.

Last update: 2026-01-20
Started: 2018-08-29