Package: deltaccd
Type: Package
Title: Quantify Rhythmic Gene Co-Expression Relative to a Reference
Version: 1.0.4
Authors@R: c(
  person('Jake', 'Hughey', , 'jakejhughey@gmail.com', c('aut', 'cre')),
  person('Elliot', 'Outland', , 'ehoutland@gmail.com', 'aut'))
Description: Infer progression of circadian rhythms in transcriptome
        data in which samples are not labeled with time of day and
        coverage of the circadian cycle may be incomplete. See Shilts
        et al. (2018) <doi:10.7717/peerj.4327>.
URL: https://deltaccd.hugheylab.org,
        https://github.com/hugheylab/deltaccd
License: GPL-2
Encoding: UTF-8
LazyData: true
LazyDataCompression: gzip
RoxygenNote: 7.2.2
Roxygen: list(markdown = TRUE)
Depends: R (>= 3.4)
Imports: doRNG (>= 1.6.6), foreach (>= 1.4.3), ggplot2 (>= 2.2.1),
        rlang (>= 0.4.11), scales (>= 0.5.0), statmod (>= 1.4.30),
        data.table (>= 1.14.0)
Suggests: doParallel (>= 1.0.11), knitr, rmarkdown, testthat (>=
        3.0.0), vdiffr
Config/testthat/edition: 3
Repository: https://hugheylab.r-universe.dev
Date/Publication: 2022-12-01 22:36:59 UTC
RemoteUrl: https://github.com/hugheylab/deltaccd
RemoteRef: HEAD
RemoteSha: ee634ebb27f1eec847d7805577426ec084ee45f9
NeedsCompilation: no
Packaged: 2026-07-03 16:47:34 UTC; root
Author: Jake Hughey [aut, cre],
  Elliot Outland [aut]
Maintainer: Jake Hughey <jakejhughey@gmail.com>